Downloads

Membrainy-2021.2.jar

• Fixed a bug where blank entries in the external library file were causing crashes

Membrainy-2021.1.jar

• Fixed an bug with loading lipids containing only one tail from an external library file

Membrainy-2020.jar

• Major rewrite to intruduce external library files, meaning now you can add your own lipids and force fields! See Tutorial 4 for instructions.
• Streamlined the analytical techniques for faster performance.
• The leaflet detection method now contains 3 approaches:
• Simple: Assigns lipids to a leaflet based on the position of the lipid's geometric center with the bilayer geometric center.
• Vector: Computes a vector between the last atom on the first tail and the phosphorous on the lipid head. Leaflets are assigned based on the direction of that vector to the z-axis.
• Index: Uses a gromacs index file to assign the leaflets. Make sure each index entry has "Leaflet" in the name.
• Various bug fixes and improvements